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    fipr-17 FIP (Fungus-Induced Protein) Related [ Caenorhabditis elegans ]

    Gene ID: 176530, updated on 9-Dec-2024

    Summary

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    Official Symbol
    fipr-17
    Official Full Name
    FIP (Fungus-Induced Protein) Related
    Primary source
    WormBase:WBGene00012965
    Locus tag
    CELE_Y48A6B.4
    See related
    AllianceGenome:WB:WBGene00012965
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in vas deferens. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See fipr-17 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    1
    Sequence:
    Chromosome: III; NC_003281.10 (11007459..11007602, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Putative H/ACA ribonucleoprotein complex subunit 2-like protein Neighboring gene Exosome complex component CSL4 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
    2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    General protein information

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    Preferred Names
    FIP (Fungus-Induced Protein) Related
    NP_499414.1
    • Product from WormBase gene class fipr;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      11007459..11007602 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067013.7 → NP_499414.1  FIP (Fungus-Induced Protein) Related [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499414.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XXD3
      Conserved Domains (1) summary
      pfam10917
      Location:1 → 19
      DUF2708; Protein of unknown function (DUF2708)
    Nucleotide Protein
    Heading Accession and Version

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