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    glb-20 GLOBIN domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 187506, updated on 9-Dec-2024

    Summary

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    Official Symbol
    glb-20
    Official Full Name
    GLOBIN domain-containing protein
    Primary source
    WormBase:WBGene00010970
    Locus tag
    CELE_R01E6.6
    See related
    AllianceGenome:WB:WBGene00010970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable heme binding activity and oxygen binding activity. Is expressed in body wall musculature; enteric muscle; head neurons; and somatic nervous system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See glb-20 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Sequence:
    Chromosome: X; NC_003284.9 (13552339..13556166, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Alpha-carbonic anhydrase domain-containing protein Neighboring gene guanylate cyclase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Caenorhabditis globin gene family reveals extensive nematode-specific radiation and diversification. Hoogewijs D, et al. BMC Evol Biol, 2008 Oct 9. PMID 18844991, Free PMC Article
    2. Wide diversity in structure and expression profiles among members of the Caenorhabditis elegans globin protein family. Hoogewijs D, et al. BMC Genomics, 2007 Oct 4. PMID 17916248, Free PMC Article
    3. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxygen binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    GLOBIN domain-containing protein
    NP_510267.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      13552339..13556166 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_077866.4 → NP_510267.2  GLOBIN domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_510267.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q21618
      Conserved Domains (1) summary
      cd01040
      Location:108 → 229
      Mb_like; myoglobin_like; M family globin domain
    Nucleotide Protein
    Heading Accession and Version

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