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    chtb-1 CHiTin Binding domain (ChtBD2) containing [ Caenorhabditis elegans ]

    Gene ID: 176315, updated on 9-Dec-2024

    Summary

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    Official Symbol
    chtb-1
    Official Full Name
    CHiTin Binding domain (ChtBD2) containing
    Primary source
    WormBase:WBGene00010573
    Locus tag
    CELE_K04H4.2
    See related
    AllianceGenome:WB:WBGene00010573
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable chitin binding activity. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See chtb-1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    22
    Sequence:
    Chromosome: III; NC_003281.10 (9347768..9355462, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dietary and environmental factors have opposite AhR-dependent effects on C. elegans healthspan. Brinkmann V, et al. Aging (Albany NY), 2020 Dec 13. PMID 33349622, Free PMC Article
    2. Mechanistic impacts of bacterial diet on dopaminergic neurodegeneration in a Caenorhabditis elegans α-synuclein model of Parkinson's disease. Gaeta AL, et al. iScience, 2023 Jun 16. PMID 37260751, Free PMC Article
    3. Aryl Hydrocarbon Receptor-Dependent and -Independent Pathways Mediate Curcumin Anti-Aging Effects. Brinkmann V, et al. Antioxidants (Basel), 2022 Mar 23. PMID 35453298, Free PMC Article
    4. A snapshot of the physical and functional wiring of the Eps15 homology domain network in the nematode. Tsushima H, et al. PLoS One, 2013. PMID 23424658, Free PMC Article
    5. KIN-4/MAST kinase promotes PTEN-mediated longevity of Caenorhabditis elegans via binding through a PDZ domain. An SWA, et al. Aging Cell, 2019 Jun. PMID 30773781, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    CHiTin Binding domain (ChtBD2) containing
    NP_001367094.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class chtb
    NP_001369838.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class chtb
    NP_001369839.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class chtb

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      9347768..9355462 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001382960.1 → NP_001369839.1  CHiTin Binding domain (ChtBD2) containing [Caenorhabditis elegans]

      Status: REVIEWED

      Conserved Domains (1) summary
      smart00494
      Location:107 → 157
      ChtBD2; Chitin-binding domain type 2

    2. NM_001382959.2 → NP_001369838.1  CHiTin Binding domain (ChtBD2) containing [Caenorhabditis elegans]

      Status: REVIEWED

      Conserved Domains (1) summary
      smart00494
      Location:107 → 157
      ChtBD2; Chitin-binding domain type 2

    3. NM_001379858.1 → NP_001367094.1  CHiTin Binding domain (ChtBD2) containing [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34504, P34505, P34506, P90907, Q6BEV9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P34504.8

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