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    Y14H12B.1 C2H2-type domain-containing protein;DUF659 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173736, updated on 18-Sep-2024

    Summary

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    Official Symbol
    Y14H12B.1
    Official Full Name
    C2H2-type domain-containing protein;DUF659 domain-containing protein
    Primary source
    WormBase:WBGene00021191
    Locus tag
    CELE_Y14H12B.1
    See related
    AllianceGenome:WB:WBGene00021191
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See Y14H12B.1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    6
    Sequence:
    Chromosome: II; NC_003280.10 (3934447..3936075)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein Neighboring gene SPK domain-containing protein Neighboring gene Signal element on autosome protein 2 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    2. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    C2H2-type domain-containing protein;DUF659 domain-containing protein
    NP_001040824.1
    • Confirmed by transcript evidence
    NP_494698.1
    • Confirmed by transcript evidence
    NP_871987.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      3934447..3936075
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062297.7 → NP_494698.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494698.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2L064
      Conserved Domains (1) summary
      pfam03286
      Location:90 → 148
      Pox_Ag35; Pox virus Ag35 surface protein

    2. NM_182187.6 → NP_871987.1  DUF659 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_871987.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8ITV5
      Conserved Domains (1) summary
      pfam10310
      Location:32 → 105
      DUF2413; Protein of unknown function (DUF2413)

    3. NM_001047359.4 → NP_001040824.1  DUF659 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040824.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G4SJZ3
    Nucleotide Protein
    Heading Accession and Version

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