U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    hum-1 Unconventional myosin-Ie [ Caenorhabditis elegans ]

    Gene ID: 172698, updated on 9-Dec-2024

    Summary

    Official Symbol
    hum-1
    Official Full Name
    Unconventional myosin-Ie
    Primary source
    WormBase:WBGene00002035
    Locus tag
    CELE_F29D10.4
    See related
    AllianceGenome:WB:WBGene00002035
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable actin filament binding activity and microfilament motor activity. Predicted to be involved in actin filament organization and endocytosis. Predicted to be part of myosin complex. Predicted to be active in several cellular components, including actin cytoskeleton; microvillus; and plasma membrane. Is expressed in several structures, including intestine; nervous system; pharynx; rectal gland cell; and reproductive system. Human ortholog(s) of this gene implicated in focal segmental glomerulosclerosis 6. Orthologous to several human genes including MYO1E (myosin IE). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See hum-1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    20
    Sequence:
    Chromosome: I; NC_003279.8 (8845809..8851116, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene PAN-3 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables actin filament binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables cytoskeletal motor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables microfilament motor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in actin filament organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in endocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in actin cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in microvillus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of myosin complex IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Unconventional myosin-Ie
    NP_492393.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      8845809..8851116 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059992.4NP_492393.1  Unconventional myosin-Ie [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492393.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17382, Q19901
      Conserved Domains (5) summary
      smart00242
      Location:9690
      MYSc; Myosin. Large ATPases
      cd01378
      Location:28677
      MYSc_Myo1; class I myosin, motor domain
      pfam05750
      Location:9061003
      Rubella_Capsid; Rubella capsid protein
      pfam06017
      Location:717902
      Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding
      cl17036
      Location:10511100
      SH3; Src Homology 3 domain superfamily