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    heri-1 Chromo domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 183036, updated on 9-Dec-2024

    Summary

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    Official Symbol
    heri-1
    Official Full Name
    Chromo domain-containing protein
    Primary source
    WormBase:WBGene00016236
    Locus tag
    CELE_C29H12.5
    See related
    AllianceGenome:WB:WBGene00016236
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in protein phosphorylation. Predicted to be active in cytoplasm. Is expressed in several structures, including Psub1; Psub2; Psub3; Psub4; and Z2. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See heri-1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    10
    Sequence:
    Chromosome: II; NC_003280.10 (6110448..6113194, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Retinoblastoma-binding protein homolog 5 Neighboring gene ncRNA Neighboring gene RGS domain-containing protein;Regulator of G-protein signaling rgs-3 Neighboring gene Uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transgenerational Epigenetic Inheritance Is Negatively Regulated by the HERI-1 Chromodomain Protein. Perales R, et al. Genetics, 2018 Dec. PMID 30389807, Free PMC Article
    2. Genomic overview of protein kinases. Manning G. WormBook, 2005 Dec 13. PMID 18050405, Free PMC Article
    3. A transcriptional cofactor regulatory network for the C. elegans intestine. Horowitz BB, et al. G3 (Bethesda), 2023 Jul 5. PMID 37119809, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Chromo domain-containing protein
    NP_495224.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      6110448..6113194 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062823.4 → NP_495224.2  Chromo domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q18313
      Conserved Domains (2) summary
      smart00298
      Location:8 → 92
      CHROMO; Chromatin organization modifier domain
      cd00180
      Location:208 → 345
      PKc; Catalytic domain of Protein Kinases
    Nucleotide Protein
    Heading Accession and Version

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