Y50D7A.1 DUF295 domain-containing protein;F-box domain-containing protein [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: Y50D7A.1
Official Full Name: DUF295 domain-containing protein;F-box domain-containing protein
Primary source: WormBase:WBGene00021751
Locus tag: CELE_Y50D7A.1
See related: AllianceGenome:WB:WBGene00021751
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable ubiquitin-like ligase-substrate adaptor activity. Predicted to be part of SCF ubiquitin ligase complex. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See Y50D7A.1 in Genome Data Viewer

Location:: chromosome: III

Exon count:: 11

Sequence:: Chromosome: III; NC_003281.10 (292640..314508)

Chromosome III - NC_003281.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

Y50D7_159.a (e-PCR)
- UniSTS:324385

Y50D7_165.a (e-PCR)
- UniSTS:324187

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables ubiquitin-like ligase-substrate adaptor activity	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of SCF ubiquitin ligase complex	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: DUF295 domain-containing protein;F-box domain-containing protein

NP_001379295.1

Confirmed by transcript evidence

NP_001379296.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003281.10 Reference assembly

Range

292640..314508

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001393250.1 → NP_001379295.1 F-box domain-containing protein [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A6V7QYH4

Conserved Domains (2) summary

PLN02153
Location:150 → 369

PLN02153; epithiospecifier protein

sd00038
Location:196 → 247

Kelch; KELCH repeat [structural motif]
NM_001393251.1 → NP_001379296.1 DUF295 domain-containing protein [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A6V7QZG4