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    dnj-9 J domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 3565947, updated on 9-Dec-2024

    Summary

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    Official Symbol
    dnj-9
    Official Full Name
    J domain-containing protein
    Primary source
    WormBase:WBGene00001027
    Locus tag
    CELE_F11G11.7
    See related
    AllianceGenome:WB:WBGene00001027
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in cristae formation. Predicted to be located in mitochondrion. Is expressed in several structures, including body wall musculature; excretory cell; intestine; nervous system; and pharynx. Orthologous to human DNAJC11 (DnaJ heat shock protein family (Hsp40) member C11). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See dnj-9 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    7
    Sequence:
    Chromosome: II; NC_003280.10 (4852056..4857820)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Nematode Specific Peptide family, group D Neighboring gene Neuropeptide-Like Protein Neighboring gene Membrane protein BRI3 Neighboring gene Nematode Specific Peptide family, group D

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. OWL1: an Arabidopsis J-domain protein involved in perception of very low light fluences. Kneissl J, et al. Plant Cell, 2009 Oct. PMID 19808946, Free PMC Article
    2. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    3. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
    4. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    5. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in cristae formation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    J domain-containing protein
    NP_494872.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      4852056..4857820
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062471.6 → NP_494872.2  J domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494872.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      P91243
      Conserved Domains (2) summary
      pfam00226
      Location:26 → 91
      DnaJ; DnaJ domain
      pfam11875
      Location:417 → 555
      DUF3395; Domain of unknown function (DUF3395)
    Nucleotide Protein
    Heading Accession and Version

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