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    • Showing Current items.

    Y46G5A.29 Uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 174922, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y46G5A.29
    Official Full Name
    Uncharacterized protein
    Primary source
    WormBase:WBGene00012917
    Locus tag
    CELE_Y46G5A.29
    See related
    AllianceGenome:WB:WBGene00012917
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable calcium ion binding activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y46G5A.29 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    12
    Sequence:
    Chromosome: II; NC_003280.10 (12856200..12862058)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Patterned expression site protein 10 Neighboring gene MI domain-containing protein Neighboring gene ncRNA Neighboring gene Sodium-dependent transporter snf-5 Neighboring gene Glycogen [starch] synthase Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Uncharacterized protein
    NP_496734.4
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      12856200..12862058
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064333.5 → NP_496734.4  Uncharacterized protein CELE_Y46G5A.29 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496734.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U2D5
      Conserved Domains (3) summary
      cd07828
      Location:574 → 749
      nitrobindin; nitrobindin heme-binding domain
      cd00054
      Location:481 → 516
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd08544
      Location:41 → 181
      Reeler; Reeler, the N-terminal domain of reelin, F-spondin, and a variety of other proteins
    Nucleotide Protein
    Heading Accession and Version

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