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    C17A2.3 N-acetylgalactosaminide beta-1,3-galactosyltransferase [ Caenorhabditis elegans ]

    Gene ID: 182699, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C17A2.3
    Official Full Name
    N-acetylgalactosaminide beta-1,3-galactosyltransferase
    Primary source
    WormBase:WBGene00015871
    Locus tag
    CELE_C17A2.3
    See related
    AllianceGenome:WB:WBGene00015871
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C17A2.3 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (3843609..3845509)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene L-Fucosyltransferase Neighboring gene Methyltransferase FkbM domain-containing protein Neighboring gene Glycosyltransferase family 92 protein Neighboring gene Nuclear receptor domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    N-acetylgalactosaminide beta-1,3-galactosyltransferase
    NP_494669.1
    • Predicted

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      3843609..3845509
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062268.1 → NP_494669.1  N-acetylgalactosaminide beta-1,3-galactosyltransferase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494669.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O16535
      Conserved Domains (1) summary
      cl21608
      Location:98 → 239
      Galactosyl_T; Galactosyltransferase
    Nucleotide Protein
    Heading Accession and Version

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