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    spe-36 EGF-like calcium-binding domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 185548, updated on 9-Dec-2024

    Summary

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    Official Symbol
    spe-36
    Official Full Name
    EGF-like calcium-binding domain-containing protein
    Primary source
    WormBase:WBGene00009589
    Locus tag
    CELE_F40F11.4
    See related
    AllianceGenome:WB:WBGene00009589
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable calcium ion binding activity. Is expressed in germ line; sperm; and spermatid. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See spe-36 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    9
    Sequence:
    Chromosome: IV; NC_003282.8 (11588260..11592265, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Rho-GAP domain-containing protein Neighboring gene ncRNA Neighboring gene Exostosin-1 homolog Neighboring gene ncRNA Neighboring gene BEN domain-containing protein Neighboring gene Trigger_C domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Abnormal cell migration protein 38

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The EGF-motif-containing protein SPE-36 is a secreted sperm protein required for fertilization in C. elegans. Krauchunas AR, et al. Curr Biol, 2023 Jul 24. PMID 37453426, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    EGF-like calcium-binding domain-containing protein
    NP_502183.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      11588260..11592265 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069782.6 → NP_502183.2  EGF-like calcium-binding domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502183.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20209
      Conserved Domains (1) summary
      cd00054
      Location:282 → 320
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    Nucleotide Protein
    Heading Accession and Version

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