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    • Showing Current items.

    Y43F8B.19 Fe2OG dioxygenase domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 6418801, updated on 9-Dec-2024

    Summary

    Official Symbol
    Y43F8B.19
    Official Full Name
    Fe2OG dioxygenase domain-containing protein
    Primary source
    WormBase:WBGene00077688
    Locus tag
    CELE_Y43F8B.19
    See related
    AllianceGenome:WB:WBGene00077688
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable procollagen-proline 4-dioxygenase activity. Predicted to be active in endoplasmic reticulum. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Y43F8B.19 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (19510768..19512310, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene SCP domain-containing protein Neighboring gene BPTI/Kunitz inhibitor domain-containing protein Neighboring gene Fe2OG dioxygenase domain-containing protein Neighboring gene ncRNA Neighboring gene GSKIP domain-containing protein

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables L-ascorbic acid binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
     
    enables procollagen-proline 4-dioxygenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Fe2OG dioxygenase domain-containing protein
    NP_001123044.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      19510768..19512310 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001129572.3NP_001123044.2  Fe2OG dioxygenase domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001123044.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      B1V8J1
      Conserved Domains (1) summary
      smart00702
      Location:43217
      P4Hc; Prolyl 4-hydroxylase alpha subunit homologues