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    B0393.7 EGF-like domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 181958, updated on 2-Nov-2024

    Summary

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    Official Symbol
    B0393.7
    Official Full Name
    EGF-like domain-containing protein
    Primary source
    WormBase:WBGene00007172
    Locus tag
    CELE_B0393.7
    See related
    AllianceGenome:WB:WBGene00007172
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See B0393.7 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    6
    Sequence:
    Chromosome: III; NC_003281.10 (4776038..4778103, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Nidogen Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene CUB domain-containing protein;Insulin/EGF-Receptor L Domain protein Neighboring gene RING-type domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    EGF-like domain-containing protein
    NP_497983.4
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      4776038..4778103 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065582.8 → NP_497983.4  EGF-like domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497983.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17496
      Conserved Domains (1) summary
      cd00112
      Location:186 → 220
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    Nucleotide Protein
    Heading Accession and Version

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