uda-1 Nucleoside-diphosphatase uda-1 [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: uda-1
Official Full Name: Nucleoside-diphosphatase uda-1
Primary source: WormBase:WBGene00010697
Locus tag: CELE_K08H10.4
See related: AllianceGenome:WB:WBGene00010697
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Enables GDP phosphatase activity and UDP phosphatase activity. Involved in GDP metabolic process and UDP metabolic process. Located in cytoplasmic vesicle membrane. Orthologous to human ENTPD5 (ectonucleoside triphosphate diphosphohydrolase 5 (inactive)) and ENTPD6 (ectonucleoside triphosphate diphosphohydrolase 6). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See uda-1 in Genome Data Viewer

Location:: chromosome: V

Exon count:: 6

Sequence:: Chromosome: V; NC_003283.11 (10004755..10007482)

Chromosome V - NC_003283.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

K08H10.4 (e-PCR)
- UniSTS:312691

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables GDP phosphatase activity	IDA Inferred from Direct Assay more info	PubMed
enables UDP phosphatase activity	IDA Inferred from Direct Assay more info	PubMed
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables nucleoside diphosphate phosphatase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in GDP metabolic process	IDA Inferred from Direct Assay more info	PubMed
involved_in UDP metabolic process	IDA Inferred from Direct Assay more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasmic vesicle membrane	IDA Inferred from Direct Assay more info	PubMed
located_in endomembrane system	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: Nucleoside-diphosphatase uda-1

NP_505573.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003283.11 Reference assembly

Range

10004755..10007482

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_073172.4 → NP_505573.1 Nucleoside-diphosphatase uda-1 [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_505573.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9XU84

Conserved Domains (1) summary

cl17037
Location:38 → 427

NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily