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    ZK792.4 ANK_REP_REGION domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178102, updated on 2-Nov-2024

    Summary

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    Official Symbol
    ZK792.4
    Official Full Name
    ANK_REP_REGION domain-containing protein
    Primary source
    WormBase:WBGene00014077
    Locus tag
    CELE_ZK792.4
    See related
    AllianceGenome:WB:WBGene00014077
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in head; intestine; nervous system; pharynx; and rectal gland cell. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 36. Orthologous to human ANKRD16 (ankyrin repeat domain 16); ESPN (espin); and ESPNL (espin like). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See ZK792.4 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    8
    Sequence:
    Chromosome: IV; NC_003282.8 (11678436..11682005, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Cysteine protease atg-4.2 Neighboring gene Innexin-8 Neighboring gene Innexin Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Nucleolar protein 9 Neighboring gene Ras protein let-60

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    ANK_REP_REGION domain-containing protein
    NP_001023619.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      11678436..11682005 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001028448.5 → NP_001023619.1  ANK_REP_REGION domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001023619.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q23595
      Conserved Domains (4) summary
      COG0666
      Location:159 → 372
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:240 → 273
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:245 → 345
      Ank_2; Ankyrin repeats (3 copies)
      cl39094
      Location:40 → 88
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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