U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ung-1 Uracil-DNA glycosylase [ Caenorhabditis elegans ]

    Gene ID: 176633, updated on 9-Dec-2024

    Summary

    Official Symbol
    ung-1
    Official Full Name
    Uracil-DNA glycosylase
    Primary source
    WormBase:WBGene00013241
    Locus tag
    CELE_Y56A3A.29
    See related
    AllianceGenome:WB:WBGene00013241
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Enables uracil DNA N-glycosylase activity. Involved in base-excision repair. Located in nucleus. Human ortholog(s) of this gene implicated in dysgammaglobulinemia and immunodeficiency with hyper IgM type 5. Orthologous to human UNG (uracil DNA glycosylase). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See ung-1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    3
    Sequence:
    Chromosome: III; NC_003281.10 (11971467..11974096, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase 3 Neighboring gene C2H2-type domain-containing protein Neighboring gene SP-RING-type domain-containing protein Neighboring gene SOSS complex subunit A homolog Neighboring gene Pyr_redox_2 domain-containing protein Neighboring gene Exonuclease domain-containing protein

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables uracil DNA N-glycosylase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables uracil DNA N-glycosylase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables uracil DNA N-glycosylase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in base-excision repair IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in base-excision repair IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in base-excision repair, AP site formation via deaminated base removal IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Uracil-DNA glycosylase
    NP_001255148.1
    • Confirmed by transcript evidence
    NP_001255149.1
    • Partially confirmed by transcript evidence
    NP_499560.1
    • Confirmed by transcript evidence
    NP_499561.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      11971467..11974096 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067159.7NP_499560.1  Uracil-DNA glycosylase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499560.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      H8ESG8, H8ESG9, Q95Q13, Q9U221
      Conserved Domains (1) summary
      PRK05254
      Location:64279
      PRK05254; uracil-DNA glycosylase; Provisional
    2. NM_067160.7NP_499561.1  Uracil-DNA glycosylase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499561.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9U221
    3. NM_001268219.3NP_001255148.1  Uracil-DNA glycosylase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255148.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9U221
      Conserved Domains (1) summary
      PRK05254
      Location:20235
      PRK05254; uracil-DNA glycosylase; Provisional
    4. NM_001268220.3NP_001255149.1  Uracil-DNA glycosylase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255149.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9U221