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    eri-9 Zc3h12a-like Ribonuclease NYN domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 175665, updated on 17-Oct-2024

    Summary

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    Official Symbol
    eri-9
    Official Full Name
    Zc3h12a-like Ribonuclease NYN domain-containing protein
    Primary source
    WormBase:WBGene00016143
    Locus tag
    CELE_C26E6.7
    See related
    AllianceGenome:WB:WBGene00016143
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See eri-9 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    10
    Sequence:
    Chromosome: III; NC_003281.10 (4932450..4934947)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Histone-lysine N-methyltransferase set-2 Neighboring gene OBG-type G domain-containing protein Neighboring gene Large ribosomal subunit protein uL3m Neighboring gene F-box/SPRY domain-containing protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Tissue specificity of Caenorhabditis elegans enhanced RNA interference mutants. Zhuang JJ, et al. Genetics, 2011 May. PMID 21385728, Free PMC Article
    2. Requirement for the ERI/DICER complex in endogenous RNA interference and sperm development in Caenorhabditis elegans. Pavelec DM, et al. Genetics, 2009 Dec. PMID 19797044, Free PMC Article
    3. GTSF-1 is required for formation of a functional RNA-dependent RNA Polymerase complex in Caenorhabditis elegans. Almeida MV, et al. EMBO J, 2018 Jun 15. PMID 29769402, Free PMC Article
    4. A ribonuclease coordinates siRNA amplification and mRNA cleavage during RNAi. Tsai HY, et al. Cell, 2015 Jan 29. PMID 25635455, Free PMC Article
    5. Tudor domain ERI-5 tethers an RNA-dependent RNA polymerase to DCR-1 to potentiate endo-RNAi. Thivierge C, et al. Nat Struct Mol Biol, 2011 Dec 18. PMID 22179787, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Zc3h12a-like Ribonuclease NYN domain-containing protein
    NP_001293626.1
    • Confirmed by transcript evidence
    NP_001293627.1
    • Confirmed by transcript evidence
    NP_001379722.1
    • Confirmed by transcript evidence
    NP_498043.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      4932450..4934947
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001392083.1 → NP_001379722.1  Zc3h12a-like Ribonuclease NYN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95QU3
      Conserved Domains (1) summary
      pfam14626
      Location:329 → 414
      RNase_Zc3h12a_2; Zc3h12a-like Ribonuclease NYN domain

    2. NM_001306697.3 → NP_001293626.1  Zc3h12a-like Ribonuclease NYN domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293626.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BTJ4
      Conserved Domains (1) summary
      pfam14626
      Location:362 → 447
      RNase_Zc3h12a_2; Zc3h12a-like Ribonuclease NYN domain

    3. NM_001306698.3 → NP_001293627.1  Zc3h12a-like Ribonuclease NYN domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293627.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BS27
      Conserved Domains (1) summary
      pfam14626
      Location:360 → 445
      RNase_Zc3h12a_2; Zc3h12a-like Ribonuclease NYN domain

    4. NM_065642.6 → NP_498043.2  Zc3h12a-like Ribonuclease NYN domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498043.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZ13
      Conserved Domains (1) summary
      pfam14626
      Location:331 → 416
      RNase_Zc3h12a_2; Zc3h12a-like Ribonuclease NYN domain
    Nucleotide Protein
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