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    K04F10.7 Protein FAM76A [ Caenorhabditis elegans ]

    Gene ID: 172335, updated on 2-Nov-2024

    Summary

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    Official Symbol
    K04F10.7
    Official Full Name
    Protein FAM76A
    Primary source
    WormBase:WBGene00019399
    Locus tag
    CELE_K04F10.7
    See related
    AllianceGenome:WB:WBGene00019399
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in nuclear speck. Orthologous to human FAM76A (family with sequence similarity 76 member A) and FAM76B (family with sequence similarity 76 member B). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See K04F10.7 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003279.8 (6366331..6368078)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Protein KATNIP homolog Neighboring gene AXH domain-containing protein Neighboring gene F-box domain-containing protein Neighboring gene PAP-associated domain-containing protein;Poly(A) RNA polymerase gld-2 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    2. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in nuclear speck IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Protein FAM76A
    NP_491838.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      6366331..6368078
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059437.7 → NP_491838.1  Protein FAM76A [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491838.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O44772
      Conserved Domains (1) summary
      pfam16046
      Location:8 → 278
      FAM76; FAM76 protein
    Nucleotide Protein
    Heading Accession and Version

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