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    • Showing Current items.

    Y57A10A.8 SPK domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 190336, updated on 18-Sep-2024

    Summary

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    Official Symbol
    Y57A10A.8
    Official Full Name
    SPK domain-containing protein
    Primary source
    WormBase:WBGene00013253
    Locus tag
    CELE_Y57A10A.8
    See related
    AllianceGenome:WB:WBGene00013253
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See Y57A10A.8 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    8
    Sequence:
    Chromosome: II; NC_003280.10 (12164839..12170762)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene Nematode cuticle collagen N-terminal domain-containing protein Neighboring gene 3'-5' exonuclease domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
    2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    SPK domain-containing protein
    NP_496588.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      12164839..12170762
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064187.6 → NP_496588.2  SPK domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496588.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9NA84
      Conserved Domains (1) summary
      smart00583
      Location:9 → 120
      SPK; domain in SET and PHD domain containing proteins and protein kinases
    Nucleotide Protein
    Heading Accession and Version

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