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    Y43F8C.7 ER membrane protein complex subunit 10 [ Caenorhabditis elegans ]

    Gene ID: 180286, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Y43F8C.7
    Official Full Name
    ER membrane protein complex subunit 10
    Primary source
    WormBase:WBGene00012829
    Locus tag
    CELE_Y43F8C.7
    See related
    AllianceGenome:WB:WBGene00012829
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in endoplasmic reticulum and membrane. Predicted to be part of EMC complex. Orthologous to human EMC10 (ER membrane protein complex subunit 10). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See Y43F8C.7 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (19641292..19644030, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene SCP domain-containing protein Neighboring gene Chromatin complexes subunit BAP18;SANT domain-containing protein Neighboring gene ncRNA Neighboring gene Mitochondrial Ribosomal Protein, Small Neighboring gene MS Related Protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    2. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    3. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    4. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    part_of EMC complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ER membrane protein complex subunit 10
    NP_507807.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      19641292..19644030 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_075406.10 → NP_507807.1  ER membrane protein complex subunit 10 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_507807.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XWP1
    Nucleotide Protein
    Heading Accession and Version

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