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    mvb-12 Multivesicular body subunit 12A [ Caenorhabditis elegans ]

    Gene ID: 182286, updated on 9-Dec-2024

    Summary

    Official Symbol
    mvb-12
    Official Full Name
    Multivesicular body subunit 12A
    Primary source
    WormBase:WBGene00015508
    Locus tag
    CELE_C06A6.3
    See related
    AllianceGenome:WB:WBGene00015508
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable SH3 domain binding activity. Involved in endosome to lysosome transport via multivesicular body sorting pathway and receptor catabolic process. Located in cytosol and endosome membrane. Part of ESCRT I complex. Is expressed in amphid neurons; hypodermis; intestine; and pm7. Orthologous to several human genes including MVB12B (multivesicular body subunit 12B). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See mvb-12 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    6
    Sequence:
    Chromosome: IV; NC_003282.8 (7830525..7832435)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene N-acyl-aliphatic-L-amino acid amidohydrolase Neighboring gene Endoplasmic reticulum resident protein 44.2 Neighboring gene FTH domain-containing protein Neighboring gene ncRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables SH3 domain binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in endosome to lysosome transport via multivesicular body sorting pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in endosome to lysosome transport via multivesicular body sorting pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in receptor catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in receptor catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of epidermal growth factor receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in viral budding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in virus maturation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of ESCRT I complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of ESCRT I complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of ESCRT I complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endosome membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in late endosome membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Multivesicular body subunit 12A
    NP_501302.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      7830525..7832435
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_068901.8NP_501302.1  Multivesicular body subunit 12A [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501302.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17687
      Conserved Domains (1) summary
      pfam10240
      Location:16272
      DUF2464; Protein of unknown function (DUF2464)