U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    M04C3.1 SNF2 N-terminal domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 3565716, updated on 2-Nov-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    M04C3.1
    Official Full Name
    SNF2 N-terminal domain-containing protein
    Primary source
    WormBase:WBGene00010850
    Locus tag
    CELE_M04C3.1
    See related
    AllianceGenome:WB:WBGene00010850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable ATP binding activity and ATP-dependent chromatin remodeler activity. Predicted to be involved in chromatin remodeling. [provided by Alliance of Genome Resources, Nov 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See M04C3.1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    13
    Sequence:
    Chromosome: V; NC_003283.11 (19437899..19445605, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Phage protein Neighboring gene BACK domain-containing protein;NR LBD domain-containing protein Neighboring gene SNF2 N-terminal domain-containing protein Neighboring gene Glutaredoxin;Spiroplasma plectrovirus-related protein;Uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    SNF2 N-terminal domain-containing protein
    NP_001368172.1
    • Confirmed by transcript evidence
    NP_001380129.1
    • Confirmed by transcript evidence
    NP_507782.2
    • Confirmed by transcript evidence
    NP_872172.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      19437899..19445605 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_182372.5 → NP_872172.2  SNF2 N-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_872172.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EFX4
      Conserved Domains (1) summary
      cl28899
      Location:428 → 606
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

    2. NM_075381.3 → NP_507782.2  SNF2 N-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_507782.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EDD0
      Conserved Domains (1) summary
      cl28899
      Location:428 → 606
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

    3. NM_001392699.1 → NP_001380129.1  SNF2 N-terminal domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      M1ZJT3
      Conserved Domains (1) summary
      cl28899
      Location:428 → 606
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

    4. NM_001380872.1 → NP_001368172.1  SNF2 N-terminal domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      M1Z848
      Conserved Domains (1) summary
      cl28899
      Location:428 → 606
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools