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    srd-53 Serpentine Receptor, class D (Delta) [ Caenorhabditis elegans ]

    Gene ID: 184430, updated on 2-Nov-2024

    Summary

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    Official Symbol
    srd-53
    Official Full Name
    Serpentine Receptor, class D (Delta)
    Primary source
    WormBase:WBGene00005131
    Locus tag
    CELE_F13G3.2
    See related
    AllianceGenome:WB:WBGene00005131
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See srd-53 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    6
    Sequence:
    Chromosome: I; NC_003279.8 (7294038..7295794)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Zinc finger protein ztf-2 Neighboring gene Secreted protein Neighboring gene Glycosyltransferase family 92 protein;Glycosyltransferase family 92 protein F13G3.3 Neighboring gene DYnein Light chain (Tctex type)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class D (Delta)
    NP_492061.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      7294038..7295794
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059660.2 → NP_492061.1  Serpentine Receptor, class D (Delta) [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492061.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q19419
      Conserved Domains (1) summary
      pfam10317
      Location:16 → 306
      7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd
    Nucleotide Protein
    Heading Accession and Version

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