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    sru-40 Serpentine Receptor, class U;Serpentine receptor class gamma [ Caenorhabditis elegans ]

    Gene ID: 187650, updated on 9-Dec-2024

    Summary

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    Official Symbol
    sru-40
    Official Full Name
    Serpentine Receptor, class U;Serpentine receptor class gamma
    Primary source
    WormBase:WBGene00005703
    Locus tag
    CELE_R07B5.3
    See related
    AllianceGenome:WB:WBGene00005703
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See sru-40 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (9832646..9834000, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene Serpentine Receptor, class T Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The CHARGE syndrome ortholog CHD-7 regulates TGF-β pathways in Caenorhabditis elegans. Jofré DM, et al. Proc Natl Acad Sci U S A, 2022 Apr 12. PMID 35394881, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class U;Serpentine receptor class gamma
    NP_001256139.1
    • Partially confirmed by transcript evidence
    NP_001256140.1
    • Confirmed by transcript evidence
    NP_001256141.1
    • Confirmed by transcript evidence
    NP_001256142.1
    • Product from WormBase gene class sru;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      9832646..9834000 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269210.2 → NP_001256139.1  Serpentine Receptor, class U [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256139.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q21784
      Conserved Domains (1) summary
      pfam10322
      Location:10 → 311
      7TM_GPCR_Sru; Serpentine type 7TM GPCR chemoreceptor Sru

    2. NM_001269211.4 → NP_001256140.1  Serpentine receptor class gamma [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256140.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F5GUB4
      Conserved Domains (1) summary
      pfam10322
      Location:9 → 116
      7TM_GPCR_Sru; Serpentine type 7TM GPCR chemoreceptor Sru

    3. NM_001269212.3 → NP_001256141.1  Serpentine receptor class gamma [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256141.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F5GUB5
      Conserved Domains (1) summary
      pfam10322
      Location:1 → 98
      7TM_GPCR_Sru; Serpentine type 7TM GPCR chemoreceptor Sru

    4. NM_001269213.3 → NP_001256142.1  Serpentine Receptor, class U [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256142.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F5GUB6
      Conserved Domains (1) summary
      pfam10322
      Location:1 → 42
      7TM_GPCR_Sru; Serpentine type 7TM GPCR chemoreceptor Sru
    Nucleotide Protein
    Heading Accession and Version

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