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    • Showing Current items.

    col-91 Putative cuticle collagen 91 [ Caenorhabditis elegans ]

    Gene ID: 184269, updated on 2-Nov-2024

    Summary

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    Official Symbol
    col-91
    Official Full Name
    Putative cuticle collagen 91
    Primary source
    WormBase:WBGene00000666
    Locus tag
    CELE_F09G8.6
    See related
    AllianceGenome:WB:WBGene00000666
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See col-91 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    2
    Sequence:
    Chromosome: III; NC_003281.10 (8262355..8263664, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Kinetochore null protein 1 Neighboring gene Uncharacterized protein Neighboring gene NPC intracellular cholesterol transporter 1 homolog 2 Neighboring gene Small ribosomal subunit protein uS9m Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    2. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables structural constituent of cuticle IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of collagen trimer IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Putative cuticle collagen 91
    NP_498814.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      8262355..8263664 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_066413.7 → NP_498814.1  Putative cuticle collagen 91 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498814.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34391
      Conserved Domains (2) summary
      pfam01391
      Location:191 → 261
      Collagen; Collagen triple helix repeat (20 copies)
      smart01088
      Location:7 → 57
      Col_cuticle_N; Nematode cuticle collagen N-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P34391.1

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