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    K07F5.22 Protein kish [ Caenorhabditis elegans ]

    Gene ID: 177838, updated on 2-Nov-2024

    Summary

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    Official Symbol
    K07F5.22
    Official Full Name
    Protein kish
    Primary source
    WormBase:WBGene00303023
    Locus tag
    CELE_K07F5.22
    See related
    AllianceGenome:WB:WBGene00303023
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Located in sarcoplasmic reticulum. Orthologous to human TMEM167B (transmembrane protein 167B). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See K07F5.22 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    3
    Sequence:
    Chromosome: IV; NC_003282.8 (9865078..9865934)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene NUC153 domain-containing protein Neighboring gene J domain-containing protein Neighboring gene Leydig cell tumor 10 kDa protein homolog Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional characterization of C. elegans Y-box-binding proteins reveals tissue-specific functions and a critical role in the formation of polysomes. Arnold A, et al. Nucleic Acids Res, 2014 Dec 1. PMID 25378320, Free PMC Article
    2. Determining the sub-cellular localization of proteins within Caenorhabditis elegans body wall muscle. Meissner B, et al. PLoS One, 2011. PMID 21611156, Free PMC Article
    3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in sarcoplasmic reticulum HDA PubMed 

    General protein information

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    Preferred Names
    Protein kish
    NP_001370130.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      9865078..9865934
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001383171.2 → NP_001370130.1  Protein kish [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8WQE6
      Conserved Domains (1) summary
      pfam06842
      Location:9 → 45
      DUF1242; Protein of unknown function (DUF1242)
    Nucleotide Protein
    Heading Accession and Version

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