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    rpl-23 Large ribosomal subunit protein uL14 [ Caenorhabditis elegans ]

    Gene ID: 175796, updated on 2-Nov-2024

    Summary

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    Official Symbol
    rpl-23
    Official Full Name
    Large ribosomal subunit protein uL14
    Primary source
    WormBase:WBGene00004435
    Locus tag
    CELE_B0336.10
    See related
    AllianceGenome:WB:WBGene00004435
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable large ribosomal subunit rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in body wall musculature; excretory cell; intestine; nervous system; and pharynx. Orthologous to human RPL23 (ribosomal protein L23). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See rpl-23 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    2
    Sequence:
    Chromosome: III; NC_003281.10 (5705525..5706127, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Ubiquitin-like protein atg-12 Neighboring gene RGS domain-containing protein;Regulator of G-protein signaling rgs-5 Neighboring gene Protein SWAP;SURP motif domain-containing protein;Suppressor of white apricot N-terminal domain-containing protein Neighboring gene Major sperm protein Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular phylogeny of beetle associated diplogastrid nematodes suggests host switching rather than nematode-beetle coevolution. Mayer WE, et al. BMC Evol Biol, 2009 Aug 24. PMID 19703296, Free PMC Article
    2. An improved method for proteomics studies in C. elegans by fluorogenic derivatization, HPLC isolation, enzymatic digestion and liquid chromatography--tandem mass spectrometric identification. Masuda M, et al. Biomed Chromatogr, 2005 Sep. PMID 15654727
    3. rRNA intermediates coordinate the formation of nucleolar vacuoles in C. elegans. Xu D, et al. Cell Rep, 2023 Aug 29. PMID 37537842
    4. Regulation of the C. elegans molt by pqn-47. Russel S, et al. Dev Biol, 2011 Dec 15. PMID 21989027, Free PMC Article
    5. Functional genomic analysis of cell division in C. elegans using RNAi of genes on chromosome III. Gönczy P, et al. Nature, 2000 Nov 16. PMID 11099034

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables large ribosomal subunit rRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Large ribosomal subunit protein uL14
    NP_498231.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      5705525..5706127 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065830.8 → NP_498231.1  Large ribosomal subunit protein uL14 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498231.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P48158
      Conserved Domains (1) summary
      PTZ00054
      Location:2 → 139
      PTZ00054; 60S ribosomal protein L23; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P48158.1

    Gene LinkOut

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