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    his-62 putative histone H2B 4 [ Caenorhabditis elegans ]

    Gene ID: 186326, updated on 9-Dec-2024

    Summary

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    Official Symbol
    his-62
    Official Full Name
    putative histone H2B 4
    Primary source
    WormBase:WBGene00001936
    Locus tag
    CELE_F55G1.3
    See related
    AllianceGenome:WB:WBGene00001936
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Orthologous to several human genes including H2BC1 (H2B clustered histone 1); H2BC10 (H2B clustered histone 10); and H2BC11 (H2B clustered histone 11). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See his-62 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    1
    Sequence:
    Chromosome: IV; NC_003282.8 (7486545..7486916)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Kinetochore-associated protein rod-1 Neighboring gene Histone H2A Neighboring gene Histone H4 Neighboring gene Histone H3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Histone gene expression and histone mRNA 3' end structure in Caenorhabditis elegans. Keall R, et al. BMC Mol Biol, 2007 Jun 14. PMID 17570845, Free PMC Article
    2. Reference quantitative transcriptome dataset for adult Caenorhabditis elegans. Piovesan A, et al. Data Brief, 2019 Aug. PMID 31440537, Free PMC Article
    3. Analysis of long-lived C. elegans daf-2 mutants using serial analysis of gene expression. Halaschek-Wiener J, et al. Genome Res, 2005 May. PMID 15837805, Free PMC Article
    4. Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity. Ceron J, et al. BMC Dev Biol, 2007 Apr 6. PMID 17417969, Free PMC Article
    5. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of nucleosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative histone H2B 4
    NP_501202.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      7486545..7486916
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_068801.3 → NP_501202.1  putative histone H2B 4 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501202.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q27876
      Conserved Domains (1) summary
      smart00427
      Location:25 → 121
      H2B; Histone H2B
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q27876.3

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