cct-6 T-complex protein 1 subunit zeta [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: cct-6
Official Full Name: T-complex protein 1 subunit zeta
Primary source: WormBase:WBGene00000381
Locus tag: CELE_F01F1.8
See related: AllianceGenome:WB:WBGene00000381
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable unfolded protein binding activity. Predicted to be involved in protein folding. Predicted to be located in cytoplasm. Predicted to be part of chaperonin-containing T-complex. Orthologous to several human genes including CCT6B (chaperonin containing TCP1 subunit 6B). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See cct-6 in Genome Data Viewer

Location:: chromosome: III

Exon count:: 6

Sequence:: Chromosome: III; NC_003281.10 (5853537..5855687, complement)

Chromosome III - NC_003281.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

F01F1.8 (e-PCR)
- UniSTS:309543

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info
enables ATP hydrolysis activity	IEA Inferred from Electronic Annotation more info
enables ATP-dependent protein folding chaperone	IEA Inferred from Electronic Annotation more info
enables unfolded protein binding	IBA Inferred from Biological aspect of Ancestor more info
enables unfolded protein binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in protein folding	IBA Inferred from Biological aspect of Ancestor more info
involved_in protein folding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of chaperonin-containing T-complex	IBA Inferred from Biological aspect of Ancestor more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: T-complex protein 1 subunit zeta

NP_741153.1

Confirmed by transcript evidence

NP_741154.1

Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003281.10 Reference assembly

Range

5853537..5855687 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_171135.10 → NP_741153.1 T-complex protein 1 subunit zeta [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_741153.1

Status: REVIEWED

UniProtKB/Swiss-Prot

P46550

Conserved Domains (2) summary

cd03342
Location:7 → 530

TCP1_zeta; TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...

TIGR02347
Location:3 → 534

chap_CCT_zeta; T-complex protein 1, zeta subunit
NM_171136.7 → NP_741154.1 T-complex protein 1 subunit zeta [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_741154.1

Status: REVIEWED

UniProtKB/TrEMBL

G8JY43

Conserved Domains (1) summary

cd03342
Location:7 → 410

TCP1_zeta; TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...