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    C27H6.8 MYG1 protein C27H6.8 [ Caenorhabditis elegans ]

    Gene ID: 179392, updated on 2-Nov-2024

    Summary

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    Official Symbol
    C27H6.8
    Official Full Name
    MYG1 protein C27H6.8
    Primary source
    WormBase:WBGene00007787
    Locus tag
    CELE_C27H6.8
    See related
    AllianceGenome:WB:WBGene00007787
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in cytoplasm and nucleus. Orthologous to human MYG1 (MYG1 exonuclease). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See C27H6.8 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (9986431..9987788, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Schlafen-like protein 1 Neighboring gene Mitochondrial genome maintenance exonuclease 1 Neighboring gene TPR_REGION domain-containing protein Neighboring gene Piwi domain-containing protein Neighboring gene Trafficking protein particle complex subunit 6B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    2. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    MYG1 protein C27H6.8
    NP_741610.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      9986431..9987788 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_171524.5 → NP_741610.1  MYG1 protein C27H6.8 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741610.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O17606
      Conserved Domains (1) summary
      pfam03690
      Location:5 → 325
      UPF0160; uncharacterized protein family (UPF0160)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O17606.2

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