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    mex-5 Zinc finger protein mex-5 [ Caenorhabditis elegans ]

    Gene ID: 178296, updated on 9-Dec-2024

    Summary

    Official Symbol
    mex-5
    Official Full Name
    Zinc finger protein mex-5
    Primary source
    WormBase:WBGene00003230
    Locus tag
    CELE_W02A2.7
    See related
    AllianceGenome:WB:WBGene00003230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Enables RNA binding activity; protein domain specific binding activity; and protein kinase binding activity. Involved in regulation of protein localization. Located in P granule and centrosome. Is expressed in germ line; head muscle; head neurons; intestine; and somatic nervous system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See mex-5 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    5
    Sequence:
    Chromosome: IV; NC_003282.8 (13353723..13356104)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Meiotic recombination protein rec-8 Neighboring gene NT-3;Transposase;Uncharacterized protein Neighboring gene Major sperm protein

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    General gene information

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding  
    enables RNA binding  
    enables mRNA 3'-UTR binding  
    enables mRNA 3'-UTR binding PubMed 
    enables mRNA binding  
    enables metal ion binding  
    enables poly-pyrimidine tract binding PubMed 
    enables protein domain specific binding PubMed 
    enables protein kinase binding PubMed 
    Component Evidence Code Pubs
    located_in P granule PubMed 
    located_in centrosome PubMed 
    located_in cytoplasm PubMed 
    located_in cytoplasm  
    is_active_in cytosol  

    General protein information

    Preferred Names
    Zinc finger protein mex-5
    NP_502566.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      13353723..13356104
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_070165.7 → NP_502566.1  Zinc finger protein mex-5 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502566.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9XUB2
      Conserved Domains (2) summary
      smart00356
      Location:270 → 298
      ZnF_C3H1; zinc finger
      pfam00642
      Location:315 → 342
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
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