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    pzf-1 Paired zinc finger protein 1 [ Caenorhabditis elegans ]

    Gene ID: 188142, updated on 9-Dec-2024

    Summary

    Official Symbol
    pzf-1
    Official Full Name
    Paired zinc finger protein 1
    Primary source
    WormBase:WBGene00011505
    Locus tag
    CELE_T05G11.1
    See related
    AllianceGenome:WB:WBGene00011505
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Involved in meiotic chromosome segregation and positive regulation of meiotic cell cycle. Predicted to be active in nucleus. Is expressed in gonad. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See pzf-1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (15926425..15928425, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene CaDmium Responsive Neighboring gene Nuclear hormone receptor family member nhr-108 Neighboring gene ShKT domain-containing protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Serpentine Receptor, class BC (Class B-like)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in meiotic chromosome segregation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of meiotic cell cycle IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Paired zinc finger protein 1
    NP_001256688.1
    • Confirmed by transcript evidence
    NP_001256689.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      15926425..15928425 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269759.2NP_001256688.1  Paired zinc finger protein 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256688.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      G5EGG3, G5EGQ2
      Conserved Domains (1) summary
      COG5236
      Location:1362
      COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
    2. NM_001269760.3NP_001256689.1  Paired zinc finger protein 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256689.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EGG3