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    iff-2 Eukaryotic translation initiation factor 5A-2 [ Caenorhabditis elegans ]

    Gene ID: 174367, updated on 9-Dec-2024

    Summary

    Official Symbol
    iff-2
    Official Full Name
    Eukaryotic translation initiation factor 5A-2
    Primary source
    WormBase:WBGene00002065
    Locus tag
    CELE_F54C9.1
    See related
    AllianceGenome:WB:WBGene00002065
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable translation elongation factor activity. Involved in several processes, including gonad morphogenesis; nematode larval development; and nematode male tail tip morphogenesis. Predicted to be located in cytoplasm. Is expressed in excretory cell; hypodermis; pharynx; rectal muscle; and spermatheca. Orthologous to human EIF5AL1 (eukaryotic translation initiation factor 5A like 1) and EIF5A2 (eukaryotic translation initiation factor 5A2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See iff-2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003280.10 (8559581..8560964, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene putative 2,4-dienoyl-CoA reductase decr-1.2 [(3E)-enoyl-CoA-producing] Neighboring gene ncRNA Neighboring gene Globin domain-containing protein Neighboring gene ncRNA Neighboring gene PID domain-containing protein Neighboring gene Heat shock 70 kDa protein 13 Neighboring gene Ovule protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ribosome binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables translation elongation factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables translation elongation factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in gamete generation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in gonad morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in nematode larval development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in nematode male tail tip morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of translational elongation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of translational termination IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in translational elongation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in translational elongation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Eukaryotic translation initiation factor 5A-2
    NP_001369877.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      8559581..8560964 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001383905.2NP_001369877.1  Eukaryotic translation initiation factor 5A-2 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q20751
      Conserved Domains (1) summary
      cl30809
      Location:13157
      PLN03107; eukaryotic translation initiation factor 5A; Provisional