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    Y53F4B.18 Amidase domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 190217, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y53F4B.18
    Official Full Name
    Amidase domain-containing protein
    Primary source
    WormBase:WBGene00013164
    Locus tag
    CELE_Y53F4B.18
    See related
    AllianceGenome:WB:WBGene00013164
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Orthologous to human FAAH2 (fatty acid amide hydrolase 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y53F4B.18 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (15064267..15071671, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene TRIP4/RQT4 C2HC5-type zinc finger domain-containing protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Uncharacterized protein Neighboring gene Major sperm protein Neighboring gene Aminopeptidase Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    2. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Amidase domain-containing protein
    NP_497103.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      15064267..15071671 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064702.3 → NP_497103.1  Amidase domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497103.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9NAB7
      Conserved Domains (1) summary
      COG0154
      Location:47 → 532
      GatA; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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