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    pals-30 Protein containing ALS2cr12 (ALS2CR12) signature [ Caenorhabditis elegans ]

    Gene ID: 190365, updated on 18-Sep-2024

    Summary

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    Official Symbol
    pals-30
    Official Full Name
    Protein containing ALS2cr12 (ALS2CR12) signature
    Primary source
    WormBase:WBGene00013294
    Locus tag
    CELE_Y57G11B.1
    See related
    AllianceGenome:WB:WBGene00013294
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See pals-30 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    8
    Sequence:
    Chromosome: IV; NC_003282.8 (14549667..14551970, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class Z Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The purine nucleoside phosphorylase pnp-1 regulates epithelial cell resistance to infection in C. elegans. Tecle E, et al. PLoS Pathog, 2021 Apr. PMID 33878133, Free PMC Article
    2. The transcription factor ZIP-1 promotes resistance to intracellular infection in Caenorhabditis elegans. Lažetić V, et al. Nat Commun, 2022 Jan 10. PMID 35013162, Free PMC Article
    3. C30F12.4 influences oogenesis, fat metabolism, and lifespan in C. elegans. Wang L, et al. Protein Cell, 2016 Oct. PMID 27638466, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Protein containing ALS2cr12 (ALS2CR12) signature
    NP_502766.1
    • Product from WormBase gene class pals;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      14549667..14551970 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_070365.2 → NP_502766.1  Protein containing ALS2cr12 (ALS2CR12) signature [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502766.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EF79
      Conserved Domains (1) summary
      pfam04094
      Location:24 → 204
      DUF390; Protein of unknown function (DUF390)
    Nucleotide Protein
    Heading Accession and Version

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