U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    tos-1 Target Of Splicing [ Caenorhabditis elegans ]

    Gene ID: 3565833, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    tos-1
    Official Full Name
    Target Of Splicing
    Primary source
    WormBase:WBGene00019466
    Locus tag
    CELE_K07B1.6
    See related
    AllianceGenome:WB:WBGene00019466
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See tos-1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (9338859..9344203, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene UnCoupling Protein (mitochondrial substrate carrier) Neighboring gene Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial Neighboring gene G-patch domain-containing protein Neighboring gene Trypsin-like protease try-5

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. In vivo effects on intron retention and exon skipping by the U2AF large subunit and SF1/BBP in the nematode Caenorhabditis elegans. Ma L, et al. RNA, 2011 Dec. PMID 22033331, Free PMC Article
    2. The Caenorhabditis elegans gene mfap-1 encodes a nuclear protein that affects alternative splicing. Ma L, et al. PLoS Genet, 2012. PMID 22829783, Free PMC Article
    3. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    Target Of Splicing
    NP_001367721.1
    • Product from WormBase gene class tos;
      Confirmed by transcript evidence
    NP_001379853.1
    • Product from WormBase gene class tos;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      9338859..9344203 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001392573.1 → NP_001379853.1  Target Of Splicing [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95R01

    2. NM_001380724.3 → NP_001367721.1  Target Of Splicing [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZK5

    RNA

    1. NR_133617.1 RNA Sequence

      Status: REVIEWED

    2. NR_133618.1 RNA Sequence

      Status: REVIEWED

    3. NR_133619.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools