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    F36A2.7 Cytochrome c oxidase subunit 4 [ Caenorhabditis elegans ]

    Gene ID: 172692, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F36A2.7
    Official Full Name
    Cytochrome c oxidase subunit 4
    Primary source
    WormBase:WBGene00009454
    Locus tag
    CELE_F36A2.7
    See related
    AllianceGenome:WB:WBGene00009454
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Is expressed in several structures, including intestine; pharynx; and spermatheca. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F36A2.7 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003279.8 (8813761..8814979)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene CID domain-containing protein Neighboring gene 14 kDa phosphohistidine phosphatase-like Neighboring gene Fibronectin type-III domain-containing protein Neighboring gene Small ribosomal subunit protein uS19 Neighboring gene Lipase_GDSL domain-containing protein;SGNH_hydro domain-containing protein Neighboring gene DNA-binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. CCAR-1 works together with the U2AF large subunit UAF-1 to regulate alternative splicing. Lugano DI, et al. RNA Biol, 2024 Jan. PMID 38126797, Free PMC Article
    2. A protein domain-based interactome network for C. elegans early embryogenesis. Boxem M, et al. Cell, 2008 Aug 8. PMID 18692475, Free PMC Article
    3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    4. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Cytochrome c oxidase subunit 4
    NP_492383.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      8813761..8814979
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059982.5 → NP_492383.1  Cytochrome c oxidase subunit 4 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492383.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      P90860
    Nucleotide Protein
    Heading Accession and Version

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