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    F49C12.11 Translation machinery-associated protein 7 homolog [ Caenorhabditis elegans ]

    Gene ID: 177756, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F49C12.11
    Official Full Name
    Translation machinery-associated protein 7 homolog
    Primary source
    WormBase:WBGene00009880
    Locus tag
    CELE_F49C12.11
    See related
    AllianceGenome:WB:WBGene00009880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in coelomocyte; hypodermis; intestine; and nervous system. Orthologous to human TMA7 (translation machinery associated 7 homolog). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F49C12.11 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    3
    Sequence:
    Chromosome: IV; NC_003282.8 (9319380..9320143)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene UBA domain-containing protein Neighboring gene 26S proteasome non-ATPase regulatory subunit 6 Neighboring gene Methyltransferase type 11 domain-containing protein Neighboring gene DUF1648 domain-containing protein;Ribonuclease kappa Neighboring gene V-type proton ATPase subunit e Neighboring gene DUF19 domain-containing protein Neighboring gene Serine/arginine repetitive matrix protein 2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathways. Lehner B, et al. Nat Genet, 2006 Aug. PMID 16845399
    2. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    General protein information

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    Preferred Names
    Translation machinery-associated protein 7 homolog
    NP_501634.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      9319380..9320143
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069233.9 → NP_501634.1  Translation machinery-associated protein 7 homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501634.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q20588
      Conserved Domains (1) summary
      pfam09072
      Location:3 → 53
      TMA7; Translation machinery associated TMA7
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q20588.1

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