U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    nhr-223 Nuclear receptor domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 188934, updated on 9-Dec-2024

    Summary

    Official Symbol
    nhr-223
    Official Full Name
    Nuclear receptor domain-containing protein
    Primary source
    WormBase:WBGene00012050
    Locus tag
    CELE_T26E4.8
    See related
    AllianceGenome:WB:WBGene00012050
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See nhr-223 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (15796387..15797534)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene L-Fucosyltransferase Neighboring gene Nucleotide-diphospho-sugar transferase domain-containing protein Neighboring gene ncRNA Neighboring gene Uncharacterized protein

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Nuclear receptor domain-containing protein
    NP_001359598.1
    • Predicted

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      15796387..15797534
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001373169.1NP_001359598.1  Nuclear receptor domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O45842
      Conserved Domains (2) summary
      smart00430
      Location:110265
      HOLI; Ligand binding domain of hormone receptors
      cl02596
      Location:249
      NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers