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    svct-1 Permease;Solute carrier family 23 member 2;Sulfate_transp domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 177946, updated on 9-Dec-2024

    Summary

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    Official Symbol
    svct-1
    Official Full Name
    Permease;Solute carrier family 23 member 2;Sulfate_transp domain-containing protein
    Primary source
    WormBase:WBGene00011596
    Locus tag
    CELE_T07G12.5
    See related
    AllianceGenome:WB:WBGene00011596
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Orthologous to human SLC23A2 (solute carrier family 23 member 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See svct-1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    10
    Sequence:
    Chromosome: IV; NC_003282.8 (10541428..10545138, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene C2H2-type domain-containing protein Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Permease;Solute carrier family 23 member 2;Sulfate_transp domain-containing protein
    NP_001129868.1
    • Confirmed by transcript evidence
    NP_001293984.1
    • Confirmed by transcript evidence
    NP_501947.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      10541428..10545138 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069546.6 → NP_501947.1  Solute carrier family 23 member 2 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501947.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O18057
      Conserved Domains (2) summary
      pfam00860
      Location:15 → 435
      Xan_ur_permease; Permease family
      cl23746
      Location:56 → 432
      HCO3_cotransp; HCO3- transporter family

    2. NM_001307055.3 → NP_001293984.1  Permease [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293984.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A061ACV1
      Conserved Domains (2) summary
      pfam00860
      Location:1 → 322
      Xan_ur_permease; Permease family
      cl23746
      Location:144 → 319
      HCO3_cotransp; HCO3- transporter family

    3. NM_001136396.4 → NP_001129868.1  Sulfate_transp domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001129868.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3GWD8
      Conserved Domains (1) summary
      cl23746
      Location:1 → 121
      HCO3_cotransp; HCO3- transporter family
    Nucleotide Protein
    Heading Accession and Version

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