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    • Showing Current items.

    F59A7.2 Late embryogenesis abundant protein D-29-like [ Caenorhabditis elegans ]

    Gene ID: 178682, updated on 4-Jan-2025

    Summary

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    Official Symbol
    F59A7.2
    Official Full Name
    Late embryogenesis abundant protein D-29-like
    Primary source
    WormBase:WBGene00019090
    Locus tag
    CELE_F59A7.2
    See related
    AllianceGenome:WB:WBGene00019090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Involved in defense response to Gram-negative bacterium. [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

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    See F59A7.2 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (2015836..2016528, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Tryptophan synthase beta chain-like PALP domain-containing protein Neighboring gene putative secreted effector Neighboring gene ORF3 Neighboring gene ncRNA Neighboring gene Secreted protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nematode Peptides with Host-Directed Anti-inflammatory Activity Rescue Caenorhabditis elegans from a Burkholderia pseudomallei Infection. Lim MP, et al. Front Microbiol, 2016. PMID 27672387, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in defense response to Gram-negative bacterium IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Late embryogenesis abundant protein D-29-like
    NP_503550.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      2015836..2016528 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071149.6 → NP_503550.1  Late embryogenesis abundant protein D-29-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503550.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O16281
    Nucleotide Protein
    Heading Accession and Version

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