U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    W08E3.4 Major sperm protein [ Caenorhabditis elegans ]

    Gene ID: 189290, updated on 28-Oct-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    W08E3.4
    Official Full Name
    Major sperm protein
    Primary source
    WormBase:WBGene00012345
    Locus tag
    CELE_W08E3.4
    See related
    AllianceGenome:WB:WBGene00012345
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See W08E3.4 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    7
    Sequence:
    Chromosome: I; NC_003279.8 (13337430..13338931, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Guanylate cyclase domain-containing protein;Soluble guanylate cyclase gcy-35 Neighboring gene Protein CASC3 Neighboring gene ncRNA Neighboring gene putative small nuclear ribonucleoprotein-associated protein B Neighboring gene Obg-like ATPase 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    Major sperm protein
    NP_001379339.1
    • Confirmed by transcript evidence
    NP_493347.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      13337430..13338931 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001392964.1 → NP_001379339.1  Major sperm protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7R9SUH3
      Conserved Domains (1) summary
      COG1196
      Location:142 → 228
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. NM_060946.6 → NP_493347.3  Major sperm protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493347.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      P91915
      Conserved Domains (1) summary
      pfam00635
      Location:64 → 125
      Motile_Sperm; MSP (Major sperm protein) domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools