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    F56D5.6 Dentin sialophosphoprotein-like;FK506-binding protein 5-like;Protein hokC [ Caenorhabditis elegans ]

    Gene ID: 177773, updated on 18-Sep-2024

    Summary

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    Official Symbol
    F56D5.6
    Official Full Name
    Dentin sialophosphoprotein-like;FK506-binding protein 5-like;Protein hokC
    Primary source
    WormBase:WBGene00010150
    Locus tag
    CELE_F56D5.6
    See related
    AllianceGenome:WB:WBGene00010150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See F56D5.6 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    12
    Sequence:
    Chromosome: IV; NC_003282.8 (9401922..9412663)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene DUF4477 domain-containing protein Neighboring gene NADH:flavin oxidoreductase/NADH oxidase N-terminal domain-containing protein Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene Coiled-coil domain-containing protein 69 Neighboring gene pseudo Neighboring gene BRCT domain-containing protein Neighboring gene G_PROTEIN_RECEP_F1_2 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Dentin sialophosphoprotein-like;FK506-binding protein 5-like;Protein hokC
    NP_001263765.1
    • Confirmed by transcript evidence
    NP_001263766.1
    • Confirmed by transcript evidence
    NP_501658.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      9401922..9412663
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069257.4 → NP_501658.2  FK506-binding protein 5-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501658.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20881
      Conserved Domains (1) summary
      COG5271
      Location:154 → 391
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

    2. NM_001276836.3 → NP_001263765.1  Dentin sialophosphoprotein-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001263765.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      I2HAJ8
      Conserved Domains (1) summary
      COG5271
      Location:129 → 366
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

    3. NM_001276837.2 → NP_001263766.1  Protein hokC [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001263766.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      I2HAJ9
    Nucleotide Protein
    Heading Accession and Version

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