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    C09E8.1 Sodium-and chloride-dependent glycine transporter 2 [ Caenorhabditis elegans ]

    Gene ID: 173447, updated on 27-Dec-2024

    Summary

    Official Symbol
    C09E8.1
    Official Full Name
    Sodium-and chloride-dependent glycine transporter 2
    Primary source
    WormBase:WBGene00015644
    Locus tag
    CELE_C09E8.1
    See related
    AllianceGenome:WB:WBGene00015644
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable glycine:sodium symporter activity. Predicted to be involved in amino acid transport and sodium ion transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See C09E8.1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    13
    Sequence:
    Chromosome: II; NC_003280.10 (556485..564061)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene F-box associated domain-containing protein Neighboring gene F-box domain-containing protein Neighboring gene Molting protein mlt-10 Neighboring gene LIPaSe related;Triacylglycerol lipase Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Nodule-specific Glycine Rich Peptide Neighboring gene Uncharacterized protein

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables glycine:sodium symporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables symporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in amino acid transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in gamma-aminobutyric acid transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in glycine transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sodium ion transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Sodium-and chloride-dependent glycine transporter 2
    NP_493757.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      556485..564061
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061356.8NP_493757.2  Sodium-and chloride-dependent glycine transporter 2 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493757.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KYM8
      Conserved Domains (1) summary
      cl00456
      Location:29463
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    RNA

    1. NR_133622.1 RNA Sequence

      Status: REVIEWED