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    bath-10 BTB and MATH domain containing [ Caenorhabditis elegans ]

    Gene ID: 173680, updated on 17-Oct-2024

    Summary

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    Official Symbol
    bath-10
    Official Full Name
    BTB and MATH domain containing
    Primary source
    WormBase:WBGene00021726
    Locus tag
    CELE_Y49F6C.4
    See related
    AllianceGenome:WB:WBGene00021726
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See bath-10 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (3375079..3376721)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene BTB domain-containing protein Neighboring gene BTB domain-containing protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    BTB and MATH domain containing
    NP_494523.1
    • Product from WormBase gene class bath;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      3375079..3376721
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062122.5 → NP_494523.1  BTB and MATH domain containing [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494523.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9TYJ1
      Conserved Domains (3) summary
      smart00225
      Location:150 → 248
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:144 → 244
      BTB; BTB/POZ domain
      pfam00917
      Location:11 → 127
      MATH; MATH domain
    Nucleotide Protein
    Heading Accession and Version

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