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    scrm-7 Phospholipid scramblase [ Caenorhabditis elegans ]

    Gene ID: 190110, updated on 9-Dec-2024

    Summary

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    Official Symbol
    scrm-7
    Official Full Name
    Phospholipid scramblase
    Primary source
    WormBase:WBGene00013052
    Locus tag
    CELE_Y50E8A.9
    See related
    AllianceGenome:WB:WBGene00013052
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable phospholipid scramblase activity. Predicted to be involved in plasma membrane phospholipid scrambling. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See scrm-7 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (14778203..14779744, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene HAlF transporter (PGP related) Neighboring gene Uncharacterized protein Neighboring gene Integrin_alpha2 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. C. elegans mitochondrial factor WAH-1 promotes phosphatidylserine externalization in apoptotic cells through phospholipid scramblase SCRM-1. Wang X, et al. Nat Cell Biol, 2007 May. PMID 17401362
    2. Aminophospholipid translocase TAT-1 promotes phosphatidylserine exposure during C. elegans apoptosis. Züllig S, et al. Curr Biol, 2007 Jun 5. PMID 17540571
    3. Comparative genomics and functional study of lipid metabolic genes in Caenorhabditis elegans. Zhang Y, et al. BMC Genomics, 2013 Mar 12. PMID 23496871, Free PMC Article
    4. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    5. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables phospholipid scramblase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables phospholipid scramblase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in plasma membrane phospholipid scrambling IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in plasma membrane phospholipid scrambling IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Phospholipid scramblase
    NP_001263891.1
    • Confirmed by transcript evidence
    NP_001263892.1
    • Partially confirmed by transcript evidence
    NP_506646.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      14778203..14779744 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_074245.3 → NP_506646.1  Phospholipid scramblase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506646.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9NAE9
      Conserved Domains (1) summary
      pfam03803
      Location:48 → 258
      Scramblase; Scramblase

    2. NM_001276962.2 → NP_001263891.1  Phospholipid scramblase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001263891.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      L8E6J6

    3. NM_001276963.1 → NP_001263892.1  Phospholipid scramblase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001263892.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      L8E6X3
    Nucleotide Protein
    Heading Accession and Version

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