arch-1 Protein archease-like [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: arch-1
Official Full Name: Protein archease-like
Primary source: WormBase:WBGene00016621
Locus tag: CELE_C43H8.1
See related: AllianceGenome:WB:WBGene00016621
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable metal ion binding activity. Predicted to be involved in tRNA splicing, via endonucleolytic cleavage and ligation. Predicted to be part of tRNA-splicing ligase complex. Orthologous to human ZBTB8OS (zinc finger and BTB domain containing 8 opposite strand). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See arch-1 in Genome Data Viewer

Location:: chromosome: I

Exon count:: 3

Sequence:: Chromosome: I; NC_003279.8 (10624464..10625387)

Chromosome I - NC_003279.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

C43H8.1 (e-PCR)
- UniSTS:320890

C43H8.2 (e-PCR)
- UniSTS:307070

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in tRNA processing	IEA Inferred from Electronic Annotation more info
involved_in tRNA splicing, via endonucleolytic cleavage and ligation	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of tRNA-splicing ligase complex	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Protein archease-like

NP_492778.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003279.8 Reference assembly

Range

10624464..10625387

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_060377.7 → NP_492778.1 Protein archease-like [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_492778.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9TZN1

Conserved Domains (1) summary

pfam01951
Location:18 → 155

Archease; Archease protein family (MTH1598/TM1083)