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    Y45G5AM.7 Cilia- and flagella-associated protein 157 [ Caenorhabditis elegans ]

    Gene ID: 178817, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y45G5AM.7
    Official Full Name
    Cilia- and flagella-associated protein 157
    Primary source
    WormBase:WBGene00021559
    Locus tag
    CELE_Y45G5AM.7
    See related
    AllianceGenome:WB:WBGene00021559
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in motile cilium. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y45G5AM.7 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (4166635..4170238, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene HTH_17 domain-containing protein Neighboring gene FBA_2 domain-containing protein Neighboring gene Rad21/Rec8-like protein C-terminal eukaryotic domain-containing protein Neighboring gene Protein pid-5 Neighboring gene Aftiphilin clathrin-binding box domain-containing protein;Clathrin_bdg domain-containing protein;Transcription factor Neighboring gene Nuclear hormone receptor 114

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics. Chen JX, et al. Mol Cell Proteomics, 2016 May. PMID 26912668, Free PMC Article
    2. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in motile cilium IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Cilia- and flagella-associated protein 157
    NP_001317849.1
    • Confirmed by transcript evidence
    NP_504160.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      4166635..4170238 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071759.5 → NP_504160.1  Cilia- and flagella-associated protein 157 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_504160.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95XJ5
      Conserved Domains (1) summary
      COG1196
      Location:81 → 348
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. NM_001330832.3 → NP_001317849.1  Cilia- and flagella-associated protein 157 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A164D3L1
    Nucleotide Protein
    Heading Accession and Version

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