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    far-1 Fatty-acid and retinol-binding protein 1 [ Caenorhabditis elegans ]

    Gene ID: 176283, updated on 9-Dec-2024

    Summary

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    Official Symbol
    far-1
    Official Full Name
    Fatty-acid and retinol-binding protein 1
    Primary source
    WormBase:WBGene00001385
    Locus tag
    CELE_F02A9.2
    See related
    AllianceGenome:WB:WBGene00001385
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable lipid binding activity. Predicted to be located in extracellular region. Is expressed in male. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See far-1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    4
    Sequence:
    Chromosome: III; NC_003281.10 (9080371..9081179, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene CX domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Differences in protein expression associated with ivermectin resistance in Caenorhabditis elegans. Sousa DM, et al. Rev Bras Parasitol Vet, 2019 Jan-Mar. PMID 30916256
    2. The FAR protein family of the nematode Caenorhabditis elegans. Differential lipid binding properties, structural characteristics, and developmental regulation. Garofalo A, et al. J Biol Chem, 2003 Mar 7. PMID 12502713
    3. The Caenorhabditis elegans RDE-10/RDE-11 complex regulates RNAi by promoting secondary siRNA amplification. Zhang C, et al. Curr Biol, 2012 May 22. PMID 22542102, Free PMC Article
    4. The RNA-binding protein repertoire of Arabidopsis thaliana. Marondedze C, et al. Sci Rep, 2016 Jul 11. PMID 27405932, Free PMC Article
    5. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Fatty-acid and retinol-binding protein 1
    NP_001254978.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      9080371..9081179 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001268049.4 → NP_001254978.1  Fatty-acid and retinol-binding protein 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001254978.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34382
      Conserved Domains (1) summary
      pfam05823
      Location:33 → 174
      Gp-FAR-1; Nematode fatty acid retinoid binding protein (Gp-FAR-1)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P34382.1

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