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    srz-5 Serpentine Receptor, class T [ Caenorhabditis elegans ]

    Gene ID: 190083, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srz-5
    Official Full Name
    Serpentine Receptor, class T
    Primary source
    WormBase:WBGene00021722
    Locus tag
    CELE_Y49F6B.11
    See related
    AllianceGenome:WB:WBGene00021722
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srz-5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (3512690..3514731, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene TransThyretin-Related family domain Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ovule protein Neighboring gene C-type lectin domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing of C. elegans balancer strains reveals previously unappreciated complex genomic rearrangements. Maroilley T, et al. Genome Res, 2023 Jan. PMID 36617680, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class T
    NP_494565.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      3512690..3514731 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062164.2 → NP_494565.2  Serpentine Receptor, class T [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494565.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N4T9
      Conserved Domains (1) summary
      pfam10325
      Location:21 → 311
      7TM_GPCR_Srz; Serpentine type 7TM GPCR chemoreceptor Srz
    Nucleotide Protein
    Heading Accession and Version

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